Data · dataset · 2026
JCVI-syn3B FtsZ:mCherry plasmid
Listed in Teesside University Research Data Repository
This plasmid was used for genetic introduction of a second copy of the FtsZ gene fused with mCherry to JCBI-syn3B for fluorescent imaging of cell division.
Description
Gibson assembly was used to construct the plasmid. Syn1.0 (GeneBank accession number CP002027) served as the template to amplify fragment 1 using primers 5’-GAATTCGCCAGAACCAGCAGCGGAGCCAGCGGATCCTTTTAAAAATGTCGGAAAGTCATC-3’ and 5’-AGCAAAGTGGGTGATAAATAAATGACAAACGAATTTAAACAAATAGC-3’, and fragment 2 using primers 5’-CGTTTGTCATTTATTTATCACCCACTTTG-3’ and 5’-ATTTGAACGTTGCGAAGCAACAGAAGCATAATAACAATTATTAAT-3’.
The vector backbone was amplified using primers 5’-AAGGATCCGCTGGCTCCGCTGCTGGTTCTGGCGAATTCATGGTATCAAAAGGAGAAGAAGATAATATG-3’ and 5’-TAATTGTTATTATGCTTCTGTTGCTTCGCAACGTTCAAATC-3’, with the ptxB-FLAG plasmid (not published) as the template. PrimeSTAR Max DNA polymerase (Takara, #R045A) was used to amplify the fragments. PCR was performed with an initial denaturation at 98 °C for 3 minutes, followed by 30 cycles of 98 °C for 10 seconds, 55 °C for 10 seconds, and 72 °C for 1 minute, with a final extension at 72 °C for 5 minutes.
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Primers 5’-TCCTCCAGCTCCTAATCCTT-3’ and 5’-TGTTTGTCGGTGAACGCTCT-3’ were used for colony PCR to identify positive clones. The final plasmid was confirmed by sequencing.
Links
Where it is published
- DOI doi.org/10.17632/x59cx6ns2h.2 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science
- Inferred from text
- Imaging 75% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/x59cx6ns2h.2 | 18 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[modality].local:modality:imaging | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |