Data · dataset · 2026
AILSA reference database: 13C NMR shifts and HOSE statistics for natural-product dereplication and shift prediction (COCONUT + NMRShiftDB)
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Description
<p dir="ltr">Pre-built SQLite reference database for AILSA (AI + LSD + Agents), an AI-agent system for computer-assisted structure elucidation (CASE) of organic natural products from NMR spectra.</p><p dir="ltr">AILSA is built on the LSD structure generator by Jean-Marc Nuzillard (Université de Reims Champagne-Ardenne).</p><p dir="ltr">Contents: 928,443 compounds (COCONUT: 895,099 natural products with predicted 13C shifts;</p><p dir="ltr">NMRShiftDB: 33,344 compounds with experimental 13C shifts), 111,493 unique molecular formulas, 7.9 million HOSE-code statistics.
One file serves both dereplication and 13C prediction.</p><p dir="ltr">Data source: the 13C shifts of the 895,099 COCONUT natural products are predicted, not measured, the 33,344 NMRShiftDB compounds carry experimental 13C shifts.</p><p dir="ltr">COCONUT 13C shifts: from J.-M. Nuzillard, Zenodo, doi:10.5281/zenodo.6561449, CC BY 4.0</p><p dir="ltr">(doi.org/10.5281/zenodo.6561449).</p><p><br></p><p dir="ltr">Usage: install AILSA (github.com/steinbeck/ailsa), run "ailsa database download" - it fetches this file and installs it as data/reference/ailsa-derep.db - and check it with "ailsa database info".
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Source code and documentation: github.com/steinbeck/ailsa.</p>
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Where it is published
- DOI doi.org/10.6084/m9.figshare.31073554.v3 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
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Topics
- From keywords
- Chemistry · Earth & Environmental Science
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/31073554 | 7 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |