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Imaging · dataset · 2026

Supplementary file 1_Deep learning with interactive segmentation for risk stratification of cystic renal lesions on tri-phase CT: a multicenter study.pdf

Listed in figshare and Loughborough Research Repository and GRANTS Data and UP Research Data Repository — shown once because both records carry DOI 10.3389/fonc.2026.1832969.s001

Background<p>Accurate preoperative risk stratification of cystic renal lesions (CRLs) remains a clinical challenge, primarily due to morphological overlap which often leads to the overtreatment of indolent cysts.

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To address this, we developed and validated an integrated deep learning framework that combines interactive segmentation with tri-phase CT feature integration to refine malignancy prediction.</p>Methods<p>This retrospective multicenter study enrolled 434 patients with CRLs from four institutions, partitioned into training (n=195), validation (n=100), and external test (n=139) cohorts.

The reference standard was histopathological diagnosis or ≥4 years of radiological stability. For volumetric segmentation, we implemented an interactive ‘human-in-the-loop’ Swin UNETR model. To integrate complementary information across the three CT phases, we then deployed a Tri-Phase-Channel (TPC) Perceiver architecture to integrate features extracted by parallel SEResNet50 backbones from unenhanced, corticomedullary, and nephrographic CT phases.

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Diagnostic performance was evaluated against the single-phase SEResNet50 models and the Bosniak classification version 2019 using the Area Under the Receiver Operating Characteristic Curve (AUC) and Decision Curve Analysis (DCA).</p>Results<p>In the external test cohort, the interactive segmentation model yielded a Dice score of 0.890. For malignancy prediction, the TPC-Perceiver attained an AUC of 0.969 (95% CI: 0.911–1.000), significantly outperforming the Bosniak classification version 2019 (AUC 0.884; p =0.016).

At the fixed probability threshold of 0.5, the model achieved a sensitivity of 94.4% and a specificity of 96.7%, compared with 100.0% and 76.9%, respectively, for the clinical standard. Furthermore, decision curve analysis indicated that the deep learning framework conferred greater net benefit across a broad range of threshold probabilities.</p>Conclusion<p>The integrated framework showed favorable performance for cystic renal lesion risk stratification.

Exploratory pairwise AUC comparisons favored the TPC Perceiver over the single-phase models and the clinical Bosniak v2019 assessment, while its AUC was comparable to that of the previous SETD model. The sensitivity-specificity profile observed at the fixed threshold suggests potential value in reducing false-positive risk stratification. Larger prospective multicenter studies are required before clinical implementation.</p>

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