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Data · dataset · 2023

RNA-Seq data of intestine of Chinese rare minnow exposed bifenthrin for 28days

Listed in ScienceDB

Description

All samples were collected from intestine of Chinese rare minnow.The fish were exposed to 0, 0.1, 0.3, and 1 μg/L of bifenthrin for 28 days, ten whole intestinal tissues per treatment group were mixed and homogenized in TRIzol reagent and stored at −80 °C for RNA sequencing.The sample from 0, 0.1, 0.3, and 1 μg/L treatment were named A0, A1, A2, and A3, respectively.The fish were exposed to 0, 0.1, 0.3, and 1 μg/L of bifenthrin for 28 days and subsequently injection with Pseudomonas fluorescens.

At 4, 12 and 36 hours postinjection (hpi) with Pseudomonas fluorescens, ten wholes intestinal tissues per treatment group were mixed and homogenized in TRIzol reagent and stored at −80 °C for RNA sequencing.The sample from 0, 0.1, 0.3, and 1 μg/L treatment at 4 hpi were named B0, B1, B2, and B3, respectively.The sample from 0, 0.1, 0.3, and 1 μg/L treatment at 12 hpi were named C0, C1, C2, and C3, respectively.The sample from 0, 0.1, 0.3, and 1 μg/L treatment at 36 hpi were named D0, D1, D2, and D3, respectively.

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Note

Each group of data was divided into two files. For example, A0 consists of A0_1 and A0_2. 

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Where it is published

Catalogue records · 1

Topics

Inferred from text
RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
SourceKeyLast seenRaw
ScienceDB10.57760/sciencedb.0719510 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:earth-environmentalmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:engineeringmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:humanitiesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:life-sciencesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:social-sciencemapping · scidb cnconnector:scidb_cn@1.0.0
concepts[modality].local:modality:rna-seqenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/description
licensesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/rights
publication_datesource · scidb cnconnector:scidb_cn@1.0.0
titlesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/title