Omics · study · 2026
Genome-wide EDS1-dependent H3K9 acetylation patterns in Topless-related 1 (TPR1) overexpressing Arabidopsis plants
Listed in NCBI GEO
We present here genome-wide H3K9 acetylation data in Arabidopsis thaliana plants overexpressing TPR1 (Topless-related 1) -GFP driven by its native promoter (TPR1-OX).
Description
We compared the H3K9 acetylation of the TPR1-OX auto-immune plants in WT (Col-0) background with eds1-2 mutant background plants which do not show the auto-immune phenotype.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE155nnn/GSE155173 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE155173 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA648915 ncbi.nlm.nih.gov/bioproject/PRJNA648915 ↗
project · from NCBI GEO
Topics
- Stated by source
- Arabidopsis thaliana · Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE155173 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:3702 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |