Data · dataset · 2024
16S rRNA amplicon sequencing from the Ocean Sampling Day (OSD) campaign June 2019
Listed in GBIF
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans.
Description
It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites.
The OSD2019 event is a continuation of the successful OSD events of Micro B3 project (microb3.eu/osd.html).
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006607.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/07c92aa7-bbd8-49f7-ad89-87a8d2480c4b ↗
landing page · from gbif
- DOI doi.org/10.15468/6dbvq7 ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006607 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/07c92aa7-bbd8-49f7-ad89-87a8d2480c4b ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | 07c92aa7-bbd8-49f7-ad89-87a8d2480c4b | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |