Text · study · 2026
Impact of SliP4 deletion on the high-light acclimation in Synechocystis sp. PCC 6803
Listed in NCBI GEO
SliP4 is a small, 37 amino acids protein that is strongly induced when the cyanobacterium Synechocystis sp.
Description
PCC 6803 is exposed to high-light conditions. Deletion mutants of the sliP4 gene manifest a light-sensitive phenotype due to impaired cyclic electron flow and state transitions.
In this study, we aimed to investigate the consequences of SliP4 deficiency on the process of high-light acclimation. The sliP4 deletion mutant demonstrated a complete gene regulatory response 30 minutes after the light intensity was increased from 50 to 250 μmol photons m-2 s-1, a process that was mediated by the RpaB-PsrR1 system. However, after the shift to high light, the mutant increased the production of extracellular polysaccharides and the cells began to aggregate, thereby effectively reducing the potential impact of light stress effects caused by the impaired capacity for cyclic electron flow and state transitions.
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This effect included the upregulation of xssA-E and xssN-P genes for the production of the sulfated exopolysaccharide synechan. Our results demonstrate that the unicellular cyanobacterium Synechocystis attempts to compensate for the crucial role of SliP4 by activating a population-level response to cope with light stress conditions, thereby revealing several genes involved in this response.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE302nnn/GSE302282 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302282 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1289804 ncbi.nlm.nih.gov/bioproject/PRJNA1289804 ↗
project · from NCBI GEO
- PubMed 41613484 pubmed.ncbi.nlm.nih.gov/41613484 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE302282 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |