Constarium
← Search

Data · dataset · 2026

Investigation and development of novel exposome informatics methodologies and solutions for the analysis and integration of phenome, genome and exposome data

Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.17034/32637606.v1

The exposome, is a concept introduced in 2005 by Christopher P. Wild.

Description

The exposome details every exposure an individual comes into contact during their lifetime, after conception. It is possible to view the exposome as its constituent parts, for example chemical compounds, biological factors, physical phenomena and socio-economic factors.

The exposome is a sibling of the genome (total number of genes) and phenome (total number of phenotypes), representing inter-connected components of human health and disease. <br><br>Biomedical informatics has played a key part in advancing phenome and genome research through computational means. For example, knowledge representation tools (ontologies, vocabularies and dictionaries), text-mining methodologies and informatics frameworks.

Read the rest (2 more)

However, the exposome field, as a more recently emerging domain, has still to receive the same level of informatic methodologies and tools from biomedical informatics. <br><br>This thesis investigates the following hypothesis ‘Biomedical informatics and open data can be leveraged to fill existing methodological gaps and investigate the exposome’, to fulfil an existing knowledge gap in exposome research. <br><br>This thesis therefore details the creation of a data-driven infrastructure which integrates the relationships between the exposome, genome and phenome through investigation and development of new methodologies and solutions, which utilise open-source data. <br><br>The Phexpo Suite is a collective representation of the cumulative work of the developed methodologies presented in the thesis.

The Phexpo Suite, where Phexpo is derived from ‘phenotype-exposome’, is an informatics resource that provides the ability to identify, analyse and explore the relationships between different components of the exposome (chemical compounds, physical phenomena or socio-economic factors) and phenome, through integration with the genome.<br><br><i>Thesis is embargoed until 31 December 2027</i>.<br><br>

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Applied computing 71% · Disease 75%
Provenance · 3 source records, 15 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/326376065 d agoJSON v1
Deakin Research Onlineoai:figshare.com:article/326376065 d agoJSON v1
DMU Figshareoai:figshare.com:article/326376065 d agoJSON v1
FieldAssertionExtractorEvidence
concepts[disease].local:disease:diseaseenrichment · zivahub uct ac zakeyword-concept-rules@1.0.0title+description (75%)
concepts[field].anzsrc:group:4601enrichment · zivahub uct ac zataxonomy-embedding@1.1.0title+keywords+description (71%)
concepts[field].local:field:computer-science-aimapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:computer-science-aimapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:earth-environmentalmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
descriptionsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/description
license_textsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
publication_datesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
titlesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/title