Constarium
← Search

Table · dataset · 2025

Data for Mapping genomic regions associated with temperature stress in the wheat pathogen Zymoseptoria tritici

Listed in ETH Zürich Research Collection

Climate change can alter interactions between plants and their pathogens, which could adversely affect crop production.

Description

To better understand the molecular mechanisms underlying the responses of pathogenic fungal to temperature stress, we conducted a quantitative trait loci (QTL) mapping study in the wheat pathogen Zymoseptoria tritici to identify genomic regions associated with colony growth and melanisation at three temperatures (100C, 180C, 270C).

We then identified likely candidate genes for thermal adaptation within these intervals by combining information regarding gene function, GO annotation enrichment, transcriptional profile, and results from previous genome wide association studies (GWAS) investigating responses to climate, temperature and thermal adaptation. The QTL mapping, conducted for two separate crosses involving four Swiss parents, found significant QTL uniquely associated with traits measured in high and low temperatures.

Read the rest (2 more)

These intervals contained many genes known to regulate responses to temperature stress, including heat shock proteins (HSPs) and proteins involved in the mitogen-activated protein kinase (MAPK) pathways, and were enriched for genes with a zinc ion binding GO annotation. We highlight the most promising candidate genes for thermal adaptation, including an ammonium transporter gene, a stress response factor (Whi1) and two MAPK pathway genes - SSk2 and Opy2.

Future validation work on these candidate genes could provide novel insight into the molecular mechanisms underlying temperature adaptation in this important wheat pathogen.

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Plant biology 73%
Provenance · 1 source records, 19 field assertions
SourceKeyLast seenRaw
ETH Zürich Research Collectionoai:www.research-collection.ethz.ch:20.500.11850/7320689 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].anzsrc:group:3108enrichment · research collection ethz chtaxonomy-embedding@1.0.0title+keywords+description (73%)
concepts[field].local:field:chemistrymapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:computer-science-aimapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:earth-environmentalmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:economics-financemapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:engineeringmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:humanitiesmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:life-sciencesmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:materials-sciencemapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:medicine-healthmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:physicsmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:psychology-behavioralmapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
concepts[field].local:field:social-sciencemapping · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
descriptionsource · research collection ethz chconnector:research_collection_ethz_ch@1.0.0/metadata/dc/description
licensesource · research collection ethz chconnector:research_collection_ethz_ch@1.0.0/metadata/dc/rights
publication_datesource · research collection ethz chconnector:research_collection_ethz_ch@1.0.0
titlesource · research collection ethz chconnector:research_collection_ethz_ch@1.0.0/metadata/dc/title