Data · dataset · 2015
HOMOLOBIND predictions
Listed in Zenodo
Description
This dataset contains results of the HOMOLOBIND program ( fredpdavis.com/homolobind ) for proteome-wide prediction of protein and ligand binding sites, described in: Proteome-wide prediction of overlapping protein and ligand binding sites using structure. Davis FP, Molecular BioSystems , 2011 dx.doi.org/10.1039/C0MB00200C The files contain predicted binding sites for several complete proteomes from the Nov 1, 2009 release of SUPERFAMILY: Homo sapiens: hs.homolobind.out.gz Mus musculus: mm.homolobind.out.gz Drosophila melanogaster: dm.homolobind.out.gz Caenorhabditis elegans: ce.homolobind.out.gz Saccharomyces cerevisiae: sc.homolobind.out.gz Escherichia coli: ec.homolobind.out.gz NCBI viral sequence set: vl.homolobind.out.gz
Links
Get the data
- vl.homolobind.out.gz zenodo.org/api/records/29597/files/vl.homolobind.out.gz/content ↗
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- mm.homolobind.out.gz zenodo.org/api/records/29597/files/mm.homolobind.out.gz/content ↗
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- sc.homolobind.out.gz zenodo.org/api/records/29597/files/sc.homolobind.out.gz/content ↗
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- ce.homolobind.out.gz zenodo.org/api/records/29597/files/ce.homolobind.out.gz/content ↗
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- dm.homolobind.out.gz zenodo.org/api/records/29597/files/dm.homolobind.out.gz/content ↗
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- ec.homolobind.out.gz zenodo.org/api/records/29597/files/ec.homolobind.out.gz/content ↗
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- hs.homolobind.out.gz zenodo.org/api/records/29597/files/hs.homolobind.out.gz/content ↗
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Where it is published
- Zenodo record zenodo.org/records/29597 ↗
landing page · from Zenodo
- DOI doi.org/10.5281/zenodo.29597 ↗
DOI / persistent id · from Zenodo
Catalogue records · 1
- Zenodo API zenodo.org/api/records/29597 ↗
metadata API · from Zenodo
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Zenodo | 29597 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Zenodo | connector:zenodo@1.0.0 | /metadata/access_right |
| byte_size | source · Zenodo | connector:zenodo@1.0.0 | |
| created_date | source · Zenodo | connector:zenodo@1.0.0 | |
| description | source · Zenodo | connector:zenodo@1.0.0 | /metadata/description |
| license_text | source · Zenodo | connector:zenodo@1.0.0 | |
| publication_date | source · Zenodo | connector:zenodo@1.0.0 | |
| title | source · Zenodo | connector:zenodo@1.0.0 | /metadata/title |
| updated_date | source · Zenodo | connector:zenodo@1.0.0 |