Data · dataset · 2025
Soil fungi from forest and grassland ecosystems across Germany (raw sequence reads 2011)
Listed in GBIF
The provided sequences were produced in the frame of the core project "Soil Fungi" of the German Biodiversity Exploratories.
Description
In May 2011, soil was taken on 300 study plots across three regions in Germany (south - Schwäbische Alb, central - Hainich-Dün, north - Schorfheide-Chorin). After extracting the DNA with the MoBio PowerSoil extraction kit, the fungal ITS (primers: ITS1f and ITS4) was targeted and amplified.
The provided sequences are produced with the Roche 454 pyrosequencer.
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006743.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/70797696-69d6-438d-a27f-d4e7458fea86 ↗
landing page · from gbif
- DOI doi.org/10.15468/sv4kq6 ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006743 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/70797696-69d6-438d-a27f-d4e7458fea86 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | 70797696-69d6-438d-a27f-d4e7458fea86 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |