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Table · dataset · 2026

Supporting data for “Comparative Genomics in the genus <i>Caenorhabditis</i> and the Discovery of a Novel Toxin-Antidote System in <i>C. elegans</i>”

Listed in figshare and Loughborough Research Repository — shown once because both records carry DOI 10.25442/hku.33393115.v1

<p dir="ltr">This dataset accompanies the thesis “Comparative Genomics in the genus Caenorhabditis and the Discovery of a Novel Toxin-Antidote System in C. elegans.” It contains 37 files documenting the comparative genomic analyses and experimental work presented in the thesis.

Description

Main and supplementary figures cover genetic mapping, inheritance tests, RNA interference, reporter expression, microscopy, sequence comparisons, regional synteny, phylogenetic relationships, and the characterization of the sept-1/zina-1 toxin-antidote system.

Additional plots summarize chromosome assignment quality, chromosome conservation, repeat composition, chromosome component sizes, and the presence or absence of developmental regulatory genes across Caenorhabditis species. Three true-scale locus plots provide synteny-based evidence for gene absence in selected species. Five Excel workbooks contain the underlying supporting information, including candidate gene annotations and alignment statistics, strain names and genotypes, software versions and links, cloning and genotyping primers, DNA constructs, expression cassettes, and reference and mutant allele sequences.

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The collection also includes editable and raster versions of a chromosome V mapping figure, along with embryo and fluorescence microscopy images. Together, these files provide the figures, supplementary tables, molecular resources, and comparative evidence needed to interpret the thesis results and trace the analyses from genomic patterns to experimental validation. They support future reuse of the associated scientific evidence.</p>

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Image 65% · Microscopy 75%
Provenance · 2 source records, 35 field assertions
SourceKeyLast seenRaw
figshareoai:figshare.com:article/333931157 d agoJSON v1
Loughborough Research Repositoryoai:figshare.com:article/333931157 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · figshare comconnector:figshare_com@1.0.0
concepts[field].anzsrc:field:310206mapping · figshare comvocabulary-mapper@1.0.0keywords['Sequence analysis']
concepts[field].anzsrc:field:310206mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Sequence analysis']
concepts[field].anzsrc:field:310207mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Statistical and quantitative genetics']
concepts[field].anzsrc:field:310207mapping · figshare comvocabulary-mapper@1.0.0keywords['Statistical and quantitative genetics']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:computer-science-aimapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:economics-financemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:engineeringmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:engineeringmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:life-sciencesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:materials-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:psychology-behavioralmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[modality].local:modality:imageenrichment · figshare comkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:microscopyenrichment · figshare comkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · figshare comconnector:figshare_com@1.0.0/metadata/dc/description
licensesource · figshare comconnector:figshare_com@1.0.0/metadata/dc/rights
publication_datesource · figshare comconnector:figshare_com@1.0.0
titlesource · figshare comconnector:figshare_com@1.0.0/metadata/dc/title