Omics · study · 2026
SlCOMT1-dependent melatonin biosynthesis is required for auxin-mediated alleviation of cadmium toxicity in tomato
Listed in NCBI GEO
Cadmium (Cd) contamination severely inhibits plant growth and development by inducing oxidative damage and disrupting cellular homeostasis.
Description
Indole-3-acetic acid (IAA) has been reported to enhance plant tolerance to abiotic stresses; however, the molecular mechanisms underlying IAA-mediated Cd tolerance remain largely unclear. In this study, wild-type tomato plants (Solanum lycopersicum L.) were treated with Cd stress and exogenous IAA, and leaf samples were subjected to transcriptome sequencing to investigate gene expression changes associated with IAA-induced Cd tolerance.
The results provide transcriptomic insights into the regulatory mechanisms of IAA in alleviating Cd toxicity in tomato and contribute to understanding the role of hormone-mediated stress adaptation in plants.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE332nnn/GSE332769 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE332769 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1469064 ncbi.nlm.nih.gov/bioproject/PRJNA1469064 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE332769 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |