Data · dataset · 2025
Metagenomic Analysis of The Composition, Abundance and Profile of Human Stool Enveloped and Extracellular Vesicles-encapsulated Nonenveloped Virus.
Listed in ScienceDB
This dataset contains viral metagenomic sequencing clean reads data derived from human stool samples.
Description
It comprises 6 DNA samples and 6 RNA samples, categorized into two groups: PS-positive and Viral-like particles (VLPs). The DNA samples labeled D1_PS to D6_PS are part of the PS-positive group, while samples labeled D1 to D6 represent the VLPs group.
In the RNA category, samples labeled A1_PS to A6_PS belong to the PS-positive group, and samples labeled A1 to A6 correspond to the VLPs RNA dataset.This metagenomic dataset provides a comprehensive profile of human stool enveloped viruses and extracellular VLP-encapsulated nonenveloped viruses. We isolated Enveloped particles from human stool extracellular VLPs using a Phosphatidylserine (PS) affinity kit. Our viral metagenomics analysis revealed significant variations in virome composition and abundance between the PS-positive and VLPs viromes.
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These findings enhance our understanding of: (1) ecological interactions between enveloped viruses (EnVs) and extracellular vesicles (EVs); (2) PS-mediated environmental persistence mechanisms; and (3) risk assessment frameworks for enteric viral transmission.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.22999 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Bioinformatics and computational biology 69% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.22999 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (69%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |