Data · dataset · 2018
Linking gene expression and oenological traits: comparison between indigenous Torulaspora delbrueckii and Saccharomyces cerevisiae strains
Listed in Teesside University Research Data Repository
Supplementary figure 1.
Description
Trinity output. PCA clustering of the samples for (A) Saccharomyces cerevisiae (B) Torulaspora delbrueckii.
Centered heatmap of differential expressed transcripts for (C) Saccharomyces cerevisiae (D) Torulaspora delbrueckii; T24 (exponential growth phase), T140 (early stationary phase) and T240 (late stationary phase). Supplementary figure 2. Homology analysis.
Read the rest (3 more)
(A) Species similarity with a cut off E-value ≤10-5. (B) Phylogeny tree of the species (C) Venn diagrams of the transcripts KO terms (Vinny 2.1). Supplementary figure 3.
KEGG Mapper Reconstruct Pathway. KEGG 01100 - Metabolic pathways populated with transcriptomes KO terms. Shared reaction (blue line), S. cerevisiae unique reaction (red line) and T. delbrueckii unique reactions (green line).
Supplementary file 1. S. cerevisiae and T. delbrueckii Trinotate and edgeR outputs. Trinity and BUsco statistscs.
Links
Where it is published
- DOI doi.org/10.17632/v8g3y2f35f.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science · Life Sciences · Microbiology
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/v8g3y2f35f.1 | 7 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:group:3107 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Microbiology'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |