Data · dataset · 2026
Biodiversity Monitoring in the Musquash Marine Protected Area using Environmental DNA - 2022
Listed in GBIF
We collected water samples from just below the surface in the Musquash Estuary MPA in 2022 for environmental DNA metabarcoding to assess and monitor the biodiversity of the MPA over time. 1L water samples were collected by Niskin bottle from a small vessel and filtered using 0.22um Sterivex filters at the St.
Description
Andrews Biological Station. Samples were extracted and sequenced on an Illumina NovaSeq platform at the Centre for Environmental Genomics Applications (St.
John's, Newfoundland). FASTQ files were demultiplexed and analyzed through the QIIME2 pipeline and denoised using dada2. This dataset consists of 12S reads targeting fishes, but other markers will be included within this project over time.
Links
Get the data
Where it is published
- GBIF dataset page gbif.org/dataset/72cf2089-2f45-409b-a622-bc51bee3a473 ↗
landing page · from gbif
- DOI doi.org/10.15468/2mmxst ↗
DOI / persistent id · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/72cf2089-2f45-409b-a622-bc51bee3a473 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | 72cf2089-2f45-409b-a622-bc51bee3a473 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| spatial | source · gbif | connector:gbif@1.0.0 | |
| temporal | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |