Constarium
← Search

Data · dataset · 2026

Sequence fragments extracted from aligned chloroplast genome sequences of Magnoliaceae

Listed in ScienceDB

We aligned 102 newly sequenced chloroplast genomes of Magnoliaceae (generated in this study) with 590 chloroplast genomes of Magnoliaceae downloaded from NCBI.

Description

Based on the NCBI annotations, sequence fragments were extracted from the aligned chloroplast genome sequences, including 86 genes, 93 intergenic spacers (IGS), and 17 introns. Additionally, the core regions of matK and rbcL were manually extracted and added to the dataset, increasing the total number of gene files to 88 and the total number of sequence files to 198.

Each sequence file contains the sequence ID, corresponding chloroplast genome ID, gene name, taxonomic information, and grouping information denoted by a two-digit code.

Links

Where it is published

Catalogue records · 1

Topics

Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
ScienceDB10.57760/sciencedb.4528510 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · scidb cnconnector:scidb_cn@1.0.0
concepts[field].anzsrc:group:3102enrichment · scidb cntaxonomy-embedding@1.0.0title+keywords+description (71%)
concepts[field].local:field:earth-environmentalmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:engineeringmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:humanitiesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:life-sciencesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:social-sciencemapping · scidb cnconnector:scidb_cn@1.0.0
descriptionsource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/description
licensesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/rights
publication_datesource · scidb cnconnector:scidb_cn@1.0.0
titlesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/title