Data · dataset · 2024
The first discovery of severe fever with thrombocytopenia virus in the center of metropolitan Beijing, China
Listed in ScienceDB
All data were collected from H. longicornis ticks that were sourced from Beijing in 2023.
Description
To gather data on the ticks, we utilized full-length mitochondrial sequencing. Specifically, one leg from each tick was removed for analysis, and tick DNA was extracted using the MightyPrep reagent for DNA Kit (Takara, Japan), following the manufacturer's instructions.
The extracted mitochondrial DNA was then sequenced using next-generation sequencing technology.For viral data collection, total RNAs were extracted from tick homogenates and hedgehog blood cells using either TRIzol reagent (Thermo Fisher Scientific, USA) or the RNeasy kit (Qiagen, Germany), in accordance with the respective manufacturer's protocols. The RNA samples were then reverse transcribed using a One-Step SYBR PrimerScript reverse transcription (RT)-PCR kit (TaKaRa, Japan).
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Following reverse transcription, the target viral fragments were amplified using the nested PCR method. The resulting PCR products were then sequenced by the Sanger method for further analysis.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.16362 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.16362 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |