Omics · study · 2026
Comparative transcriptome analysis of resistant and susceptible Brassica juncea lines infected with Albugo candida reveal white rust defense mechanism
Listed in NCBI GEO
In this study, we aim to elucidate the transcriptome of white rust resistance in contrasting resistant and susceptible Brassica juncea lines.
Description
We have taken Near-Isogenic lines (NILs) fpor our study. These NILs, sharing an almost identical genetic background but differing in the presence or absence of a resistance locus, provide an excellent system for investigating the mechanistic basis of resistance.
So, activation of defense-related genes downstream of R-gene recognition further reinforces resistance and distinguishes resistant from susceptible interactions.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE327nnn/GSE327766 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327766 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1452777 ncbi.nlm.nih.gov/bioproject/PRJNA1452777 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE327766 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |