Data · dataset · 2021
Dataset of SARS-CoV-2 wastewater data from Östhammar, Sweden
Listed in Researchdata.se
This is a metadata record for a continuously updated dataset of SARS-CoV-2 RNA data in wastewater in Östhammar, Sweden.
Description
The dataset is part of a research study led associate professor Anna J. Székely (SLU, Swedish University of Agricultural Sciences) and her research groups in collaboration with Uppsala Vatten. The research group is part of the Environmental Virus Profiling Research Area of the SciLifeLab National COVID-19 Research Program.
The viral content is concentrated according to the protocol from Ahmed et al. doi.org/10.1016/j.scitotenv.2020.139960according to the modified electronegative filtration method. Viral RNA is extracted and SARS-CoV-2 gene copy nr quantified using R-qPCR. Recovery efficiency is measured using Bovine coronavirus (BCoV) as a virus surrogate.
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Pepper mild mottle virus (PPMoV) is used to correct for variations in water size and flow. For more information see covid19dataportal.se/data_types/environment/wastewater/#uppsala The dataset for Östhammar started week 14 2021. The dataset is available as part of the Environmental Virus Profiling data section.
The amount of SARS-CoV-2 virus in wastewater across Sweden" covid19dataportal.se/data_types/environment/wastewater/#uppsala on the Swedish COVID-19 Data Portal (covid19dataportal.se). The dataset is also available as part of the CRUSH Covid project crush-covid.shinyapps.io/crush_covid/ Funded by SciLifeLab/KAW National COVID-19 Research Program scilifelab.se/covid-19/national-program/
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.14743425 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Medicine & Health
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-14743425/0 | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |