Data · dataset · 2025
Chromosome-level genome of Iris domestica
Listed in ScienceDB
This study conducted whole genome assembly on diploid plant Iris domestica (estimated genome size of 4.35 Gb).Using a PacBio HiFi (61 ×) combined with DNBSeq (78 ×) and Hi-C (145 ×) sequencing strategy, a contig N50 of 6.53 Mb was initially assembled by Hifiasm.
Description
Then, 99.34% of the sequence was mounted onto 16 chromosomes using Hi-C technology, resulting in a total assembly length of 4.52 Gb, with scaffold N50 reaching 270.4 Mb, and with BUSCO integrity of 99.05%—indicating high assembly quality.This assembly provides a high-quality reference genome for studies on the phylogenetic evolution of plants in the Iris genus and research on isoflavonoid biosynthesis.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.j00210.00050 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Genetics 70% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.j00210.00050 | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (70%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |