Data · dataset · 2025
Spatial, Genetic, and Epigenetic Regulation of Intestinal Klebsiella and Enterococcus Pathobionts - Supplementary Data
Listed in Borealis
Description
This deposit contains all supplementary materials associated with Chapter 3 of the PhD thesis of Nazanin Arjomand Fard, titled ‘Spatial, Genetic, and Epigenetic Regulation of Intestinal Klebsiella and Enterococcus Pathobionts.’ The files include cohort metadata, histology scores, and datasets derived from whole-genome sequencing, including gene annotations, virulence profiling, antimicrobial resistance analysis, phylogenetic metadata, SNP analysis, and methylation profiling.
A README file is provided to describe the contents of each file. This study was approved by the University of Alberta Research Ethics Board (PRO00042980).
Links
Where it is published
- Dataverse dataset page borealisdata.ca/dataset.xhtml?persistentId=doi%3A10.5683%2FSP3%2FA0VCBD ↗
landing page · from borealisdata ca
- DOI doi.org/10.5683/sp3/a0vcbd ↗
DOI / persistent id · from borealisdata ca
Catalogue records · 1
- Dataverse API borealisdata.ca/api/datasets/:persistentId/?persistentId=doi%3A10.5683%2FSP3%2… ↗
metadata API · from borealisdata ca
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health
- Inferred from text
- DNA methylation profiling 65% · Genetics 74% · Genome sequencing 65% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Borealis | doi:10.5683/SP3/A0VCBD | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3105 | enrichment · borealisdata ca | taxonomy-embedding@1.1.0 | title+keywords+description (74%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[method].local:method:dna-methylation-profiling | enrichment · borealisdata ca | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:genome-sequencing | enrichment · borealisdata ca | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · borealisdata ca | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| description | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /description |
| publication_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| title | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /name |
| updated_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| version_label | source · borealisdata ca | connector:borealisdata_ca@1.0.0 |