Data · dataset · 2025
RNA-seq of the GaMYB- and GaGST-VIGS petal samples
Listed in ScienceDB
To provide further understandings underlying the molecular mechanisms of the GaMYB- and GaGST-VIGS lines, the G. arboreum petal samples after injecting the GaMYB and GaGST segments-harboring vectors were respectively compared with those empty vector injections.
Description
Samples were collected at stages II and III (3 and 6 days after injection, respectively), at which period of time the red spots are largely formed and expanded (Zhang et al., 2022).
A total of 4678 (5540) and 1987 (2658) differentially expressed genes (DEGs) were respectively detected at stages II and III when the GaMYB (GaGST) was silenced. The data have already been deposited in the NCBI under the accession PRJNA1129684 (ncbi.nlm.nih.gov/bioproject/PRJNA1129684/)
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.j00210.00033 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Bioinformatics and computational biology 70% · RNA sequencing 65%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.j00210.00033 | 7 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (70%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |