Data · collection · 2015
The mitochondrial genome of the deep-sea snail Provanna sp. (Gastropoda: Provannidae)
Listed in DataCite
The genomic DNA of two Provanna sp. individuals was extracted, sequenced using an Illumina HiSeq1500, and the mitogenome was assembled.
Description
The nearly complete metogenome was 16,183 bp in length, consisting of 37 typical metazoan mitochondrial genes with the typical caenogastropod mitochondrial gene order. All mitochondrial genes were encoded on the heavy strand with the exception of eight transfer RNA genes.
To reconstruct the phylogenetic position of the deep-sea Provannidae, we used amino acid sequences of all the 13 mitochondrial protein-coding genes in Bayesian inference, maximum likelihood, and maximum parsimony analyses with sequences of selected gastropods. The resultant phylogenetic trees supported the placement of Provannidae in the superfamily Abyssochrysoidea of the clade Littorinimorpha of Gastropoda, providing new data for understanding the phylogeny of these deep-sea snails.
Links
Where it is published
- Repository landing page tandf.figshare.com/collections/The_mitochondrial_genome_of_the_deep_sea_snail_i_P… ↗
landing page · from DataCite
- Repository landing page tandf.figshare.com/collections/The_mitochondrial_genome_of_the_deep_sea_snail_i_P… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.c.2114150 ↗
DOI / persistent id · from DataCite
- DOI doi.org/10.6084/m9.figshare.c.2114150.v1 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 4
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.c.2114150.v1 ↗
metadata API · from DataCite
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.c.2114150 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.c.2114150.v1 ↗
catalogue entry · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.c.2114150 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Biological sciences · Chemical sciences · Chemical sciences · Clinical medicine · Clinical medicine
- From keywords
- Life Sciences · Life Sciences
Provenance · 2 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.c.2114150 | 12 d ago | JSON v1 |
| DataCite | 10.6084/m9.figshare.c.2114150.v1 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:chemical-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:chemical-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:clinical-medicine | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:clinical-medicine | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |