Data · dataset · 2022
Example fast mass microscopy image of two TEM grids
Listed in IISH Dataverse
Description
This is a .tpx3c file that is the result of a fast mass microscopy imaging experiment of two overlaying grids. This file is a mass spectral image that can be converted into, for example, a set of .png images that correspond to mass peaks or into another mass spectrometry imaging (MSI) data file format such as .imzml. This GitHub page: github.com/M4i-Imaging-Mass-Spectrometry/fast-mass-microscopy-example contains example code and instructions to work with the file in this repository as well as some example outputs that can be generated from this file using the example code in the GitHub page.
This .tpx3c file is intended to pair with the GitHub code to allow others to understand the method of fast mass microscopy image acquisition and construction.
Links
Where it is published
- Dataverse dataset page dataverse.nl/dataset.xhtml?persistentId=doi%3A10.34894%2FXKYD0Q ↗
landing page · from datasets iisg amsterdam
- DOI doi.org/10.34894/xkyd0q ↗
DOI / persistent id · from datasets iisg amsterdam
Catalogue records · 1
- Dataverse API dataverse.nl/api/datasets/:persistentId/?persistentId=doi%3A10.34894%2FXKYD… ↗
metadata API · from datasets iisg amsterdam
Topics
- Stated by source
- Chemistry · Computer and Information Science
- From keywords
- Chemistry
- Inferred from text
- Image 75% · Imaging 75% · Mass spectrometry 75% · Microscopy 75% · Physical chemistry 68%
Provenance · 1 source records, 14 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| IISH Dataverse | doi:10.34894/XKYD0Q | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3406 | enrichment · datasets iisg amsterdam | taxonomy-embedding@1.1.0 | title+keywords+description (68%) |
| concepts[field].dataverse_subject:chemistry | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].dataverse_subject:computer-and-information-science | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:chemistry | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[modality].local:modality:image | enrichment · datasets iisg amsterdam | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:imaging | enrichment · datasets iisg amsterdam | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:mass-spectrometry | enrichment · datasets iisg amsterdam | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:microscopy | enrichment · datasets iisg amsterdam | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| description | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /description |
| publication_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| title | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /name |
| updated_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| version_label | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 |