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Data · dataset · 2024

SeqLengthPlot assessment on the de novo paired-end transcriptome assembly of Savalia savaglia

Listed in Teesside University Research Data Repository

This dataset contains the output folder compiled by SeqLengthPlot assessed on the de novo paired-end transcriptome assembly of the false black coral Savalia savaglia.

Description

The folder seq_length_Assembly_Ss_PE.Trinity contains: • seq_above199bp.fasta: Retrieved FASTA file containing transcripts with lengths of 200 bp and above, after splitting of the input FASTA file. • seq_below200bp.fasta: Retrieved FASTA file containing transcripts with lengths below 200 bp, after splitting of the input FASTA file. • seq_length_distribution_above99bp.png: PNG image file showing a histogram of transcripts with lengths of 200 bp and above on a linear scale. • seq_length_distribution_above199_log.png: PNG image file showing a histogram of transcripts with lengths of 200 bp and above on a logarithmic scale. • seq_length_distribution_below200bp.png: PNG image file showing a histogram of transcripts with lengths below 200 bp on a linear scale. • seq_length_distribution_below200_log.png: PNG image file showing a histogram of transcripts with lengths below 200 bp on a logarithmic scale. • seq_length_stats_by_threshold_200.txt: Text file containing detailed statistics of the transcripts lengths in the input FASTA file, including the total number of sequences, the number of sequences 200 bp and above, the number of sequences below 200 bp, and the corresponding minimum and maximum lengths.

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Where it is published

Catalogue records · 1

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Provenance · 1 source records, 10 field assertions
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Teesside University Research Data Repositoryoai:data.mendeley.com/ngxzc3dcfp.316 h agoJSON v1
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concepts[field].anzsrc:field:310206mapping · researchdata tees ac ukvocabulary-mapper@1.0.0keywords['Sequence Analysis']
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