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Omics · study · 2026

Conserved anterior/posterior tissue asymmetry encodes proximal/distal positional information during axolotl limb regeneration

Listed in NCBI GEO

The ability of mammals to regenerate missing limb structures is limited to the distal fingertip.

Description

In contrast, axolotls can regenerate entire limbs, offering a powerful model to uncover conserved patterning mechanisms. Axolotl limb regeneration requires the active deployment of molecular signaling pathways that re-create the anterior-posterior (A/P) axis.

However, how A/P patterning is modulated across limb segments, and whether similar mechanisms operate in mammals, remains unclear. To address this, we performed spatial transcriptomic analyses on regenerating axolotl limbs using a newly developed SpatialFlux package. Interestingly, we found that A/P genes were expressed in an asymmetric fashion along the limbs proximal/distal (Pr/Di) axis in uninjured and regenerating axolotl limb tissues.

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This asymmetric A/P boundary aligns with the expression of AP-1 complex components and ERK signaling activation previously shown to be distally enriched in developing embryonic limb buds. Treatment of blastemas in different limb positions with an ERK inhibitor shows that ERK signaling is an upstream modulator of both distal and posterior limb patterning genes, linking the asymmetric A/P boundary with the Pr/Di positioning of the blastema along the limb axis.

These findings challenge the long-standing model of a symmetrical A/P midline boundary in limbs, offering clarity to findings that previously were incongruent with the midline boundary model. Here, we propose a revised asymmetric boundary model, in which shifting A/P ratios regulates Pr/Di patterning. Remarkably, this same pattern is observed in fetal human limbs, revealing a new, evolutionarily conserved paradigm for developmental and regenerative limb patterning.

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Life Sciences
Provenance · 1 source records, 6 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32896514 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title