Constarium
← Search

Data · dataset · 2026

Transcriptome sequencing dataset of the Pardosa pseudoannulata under cadmium and polystyrene microplastic stress

Listed in ScienceDB

Raw data sequences of the wolf spider (Pardosa pseudoannulata).

Description

Total RNA extraction was performed with TRNzol Universal Reagent (TIANGEN Biotech, Beijing, China) according to the manufacturer’s instructions. Sequencing libraries were constructed using the Fast RNA-seq Lib Prep Kit V2 (Cat.

No. Rk20306, ABclonal, Wuhan, China). High-throughput sequencing was conducted for all samples on an Illumina NovaSeq X Plus instrument. Raw sequencing reads were processed to obtain clean reads by removing adapter sequences, reads containing poly-N regions, and low-quality reads.

Read the rest (1 more)

Clean reads were then assembled de novo using Trinity to generate reference transcripts for downstream analysis. The data files are in FASTQ format.

Links

Where it is published

Catalogue records · 1

Topics

Provenance · 1 source records, 13 field assertions
SourceKeyLast seenRaw
ScienceDB10.57760/sciencedb.365627 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · scidb cnconnector:scidb_cn@1.0.0
concepts[field].anzsrc:group:3102enrichment · scidb cntaxonomy-embedding@1.0.0title+keywords+description (69%)
concepts[field].local:field:earth-environmentalmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:engineeringmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:humanitiesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:life-sciencesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:social-sciencemapping · scidb cnconnector:scidb_cn@1.0.0
concepts[modality].local:modality:rna-seqenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:sequencingenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/description
licensesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/rights
publication_datesource · scidb cnconnector:scidb_cn@1.0.0
titlesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/title