Omics · study · 2026
Transcriptome profiling reveals the molecular mechanism of cuticular wax (bloom) formation during blueberry fruit development.
Listed in NCBI GEO
The cuticular wax, commonly known as fruit bloom, plays a crucial role in the postharvest quality, shelf-life, and stress resistance of blueberries.
Description
However, the transcriptional regulatory networks underlying its formation during fruit maturation remain largely unknown. In this study, we performed comparative transcriptome sequencing (RNA-seq) on blueberry fruits at three critical developmental stages: the early green fruit stage (stage 1), the color-break stage (stage 2), and the mature stage (stage 3).
A total of 9 cDNA libraries (three independent biological replicates per developmental stage) were constructed and sequenced. This dataset captures the dynamic transcriptional reprogramming during fruit development, specifically highlighting the spatiotemporal expression patterns of genes involved in lipid metabolism, very-long-chain fatty acid (VLCFA) elongation, triterpenoid biosynthesis, and ABC transporter-mediated secretion.
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The provided RNA-seq data offer valuable insights into the molecular mechanisms of blueberry cuticular wax formation and serve as a fundamental resource for discovering key candidate genes for fruit quality improvement and genetic breeding.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE327nnn/GSE327820 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327820 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1452846 ncbi.nlm.nih.gov/bioproject/PRJNA1452846 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE327820 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |