Imaging · study · 2026
Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs
Listed in NCBI GEO
Spatial transcriptomic analysis of Mycoplasma hyopneumoniae infection in porcine lung tissue using 10x Genomics Visium platform.
Description
Forty-eight pigs (24 Chenghua and 24 Yorkshire) were divided into infection and control groups. Lung tissues were collected at days 28 post-infection.
Twelve samples underwent spatial transcriptomic sequencing: CHI (n=4), YYI (n=4), CHC (n=2), and YYC (n=2).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306706 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306706 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1311847 ncbi.nlm.nih.gov/bioproject/PRJNA1311847 ↗
project · from NCBI GEO
Topics
- Stated by source
- Other · Sus scrofa
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306706 | 7 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9823 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |