Omics · study · 2026
Targeting a novel double-stranded DNA-binding protein of Plasmodium falciparum impairs parasite growth by repressing global gene expression.
Listed in NCBI GEO
The intricate life cycle of Plasmodium falciparum necessitates precise control of gene expression throughout its various stages of development.
Description
These developmental transitions rely on alternating gene expression, which is finely controlled by transcription factors. Here in , we characterised a novel DNA-binding small protein (PfDBSP) that harbours a nuclear localisation signal and localises to the parasite nucleus during the trophozoite and schizont stages.
PfDBSP depicts a strong affinity to double-stranded DNA, and ChIP-Seq analysis of PfDBSP revealed that it binds to 1868 gene elements in the parasite genome, which mainly include genes crucial to parasite survival.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE337nnn/GSE337518 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337518 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1489801 ncbi.nlm.nih.gov/bioproject/PRJNA1489801 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE337518 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |