Omics · study · 2026
Miniaturisation of duckweeds occurred through compression of the angiosperm body plan
Listed in NCBI GEO
We performed RNA-seq on microdissected regions of Lemna minor (clone 8623) and Spirodela polyrhiza (clone 9509) fronds, alongside the related aroids Pistia stratiotes (water lettuce) and Colocasia esculenta (taro), to define region-specific transcriptomes and compare organ-identity programmes across species.
Description
Transcript abundance was quantified with Salmon v1.10.0 and cross-species comparisons were performed on 6,230 one-to-one orthologues identified by OrthoFinder v3.0.1b1.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE325nnn/GSE325314 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325314 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1439627 ncbi.nlm.nih.gov/bioproject/PRJNA1439627 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE325314 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |