Omics · study · 2026
Rat somatic genome editing enables ER+ breast cancer modeling
Listed in NCBI GEO
Genetically engineered mouse models have advanced cancer research but often fail to capture key features of certain human tumors.
Description
Rats, with distinct physiology and tumor biology, offer a powerful alternative, yet their use has been constrained by technical barriers to genome editing. Here, we develop efficient somatic genome editing approaches in rats, enabling both indel and substitution mutations, and apply them to model estrogen receptor (ER)-positive breast cancer, which represents ~70% of human cases but remains poorly represented in mice.
The resulting rat tumors closely recapitulate human disease in histology, hormone responsiveness, and microenvironmental features. By contrast, identical genetic alterations in mice failed to yield ER+ tumors, underscoring fundamental species differences in tumorigenesis. This platform provides a versatile and scalable platform for rapid generation of clinically relevant rat tumor models, opening new avenues to investigate mechanisms of tumor biology, therapeutic response, and immune interactions in previously inaccessible cancer subtypes.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE307nnn/GSE307807 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307807 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1327354 ncbi.nlm.nih.gov/bioproject/PRJNA1327354 ↗
project · from NCBI GEO
- PubMed 42330283 pubmed.ncbi.nlm.nih.gov/42330283 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Rattus norvegicus
- From keywords
- Life Sciences
Related
- Possibly the same asRat somatic genome editing enables ER+ breast cancer modeling
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE307807 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10116 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |