Data · dataset · 2025
How groundwater abstraction impacts groundwater ecosystems
Listed in Macquarie University Research Data Repository
Description
<p dir="ltr">Groundwater pump test - see Methods -- Read me.txt file for data collection methods.</p><p><br></p><p dir="ltr">Microbial assemblage data derived from Illumina sequencing of 16S rDNA amplicons. Sequence data were processed using Greenfield Hybrid Analysis Pipeline (GHAP) v2.2, created by CSIRO Australia (available at cloudstor.aarnet.edu.au/plus/s/ pUvwME6fMeCcX - zL). Taxonomic assignment is based on the Ribosomal Database Project (RDP) Classifier (Wang, Garrity et al. 2007).
OTUs were assigned using a 97% similarity threshold). Low abundant OTUs (<10), organelles and unassigned taxa at kingdom level were removed.</p>
Links
Where it is published
- DOI doi.org/10.25949/28267148.v1 ↗
DOI / persistent id · from figshare mq edu au
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare mq edu au
Topics
- From keywords
- Earth & Environmental Science · Ecosystem function · Freshwater ecology · Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Macquarie University Research Data Repository | oai:figshare.com:article/28267148 | 14 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:field:310304 | mapping · figshare mq edu au | vocabulary-mapper@1.0.0 | keywords['Freshwater ecology'] |
| concepts[field].anzsrc:field:410203 | mapping · figshare mq edu au | vocabulary-mapper@1.0.0 | keywords['Ecosystem function'] |
| concepts[field].local:field:earth-environmental | mapping · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · figshare mq edu au | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | /metadata/dc/description |
| license_text | source · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | |
| publication_date | source · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | |
| title | source · figshare mq edu au | connector:figshare_mq_edu_au@1.0.0 | /metadata/dc/title |