Data · dataset · 2026
DARTS: an open-source Python pipeline for Ca2+ microdomain analysis in live cell imaging data
Listed in Hamburger Zentrum für Sprachkorpora Korpus Repositorium
Description
This dataset contains data used in the publication: Woelk L-M, Kovacevic D, Husseini H, Förster F, Gerlach F, Möckl F, Altfeld M, Guse AH, Diercks B-P and Werner R (2024) DARTS: an open-source Python pipeline for Ca 2+ microdomain analysis in live cell imaging data. Front. Immunol. 14:1299435. doi: 10.3389/fimmu.2023.1299435 The open-source Python pipeline is available via github: github.com/IPMI-ICNS-UKE/DARTS Results were produced with the original release: github.com/IPMI-ICNS-UKE/DARTS/releases/tag/v1.0.0 The dataset contains files to reproduce paper results and figure content.
Links
Where it is published
- fdr.uni-hamburg.de /record/18801 ↗
Hamburger Zentrum für Sprachkorpora Korpus Repositorium record
landing page · from fdr uni hamburg de
- DOI doi.org/10.25592/uhhfdm.18801 ↗
DOI / persistent id · from fdr uni hamburg de
Catalogue records · 1
- InvenioRDM API fdr.uni-hamburg.de/api/records/18801 ↗
metadata API · from fdr uni hamburg de
Topics
- From keywords
- Life Sciences
- Inferred from text
- Imaging 75% · Proteomics and metabolomics 77%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Hamburger Zentrum für Sprachkorpora Korpus Repositorium | 18801 | 2 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| concepts[field].anzsrc:field:310205 | enrichment · fdr uni hamburg de | taxonomy-embedding@1.1.0 | title+keywords+description (77%) |
| concepts[field].local:field:life-sciences | mapping · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| concepts[modality].local:modality:imaging | enrichment · fdr uni hamburg de | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | /metadata/description |
| publication_date | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| title | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | /metadata/title |
| updated_date | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| version_label | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 |