Data · collection · 2015
Genome information comparison study of strains belonged to the genus Domibacillus
Listed in NASA Earthdata CMR
Comparison of 16S rRNA gene sequences showed that strain PAMC 80007 was most closely related to Domibacillus genus.
Description
Then, whole genome sequencing of the strains belong to Domibacillus and PAMC 80007 was performed. Genomic information comparison result showed that the strain PAMC 80007 belonged to the genus Domibacillus.
Therefore, strain PAMC 80007 represents a novel species of the genus Domibacillus, for which the name Domibacillus tundrae sp. nov. is proposed. Genomic information comparison of strains belonged to the genus Domibacillus for identification of strain PAMC 80007
Links
Documentation and papers
- PROJECT HOME PAGE kpdc.kopri.re.kr ↗
project · from NASA CMR
Catalogue records · 2
- CMR record cmr.earthdata.nasa.gov/search/concepts/C2244296876-AMD_KOPRI.html ↗
catalogue entry · from NASA CMR
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C2244296876-AMD_KOPRI.umm_json ↗
metadata API · from NASA CMR
Topics
- Stated by source
- Cyanobacteria (Blue-Green Algae) · NOT APPLICABLE · NOT APPLICABLE
- Inferred from text
- Genome sequencing 75% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C2244296876-AMD_KOPRI | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[instrument].gcmd_instrument:not-applicable | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biological-classification/bacteria-archaea/cyanobacteria-blue-green-algae | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[modality].local:modality:genome-sequencing | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[platform].gcmd_platform:not-applicable | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| created_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| publication_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| updated_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |