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Data · dataset · 2026

16S rRNA gene high-throughput sequencing data of rhizosphere microorganisms of broad bean grown at different altitudes in Qinghai Province

Listed in ScienceDB

Soil total DNA was extracted using the FastDNA® Spin Kit for Soil.

Description

The V4 region of the bacterial 16S rRNA gene was selected as the amplification target, and PCR amplification was performed with universal primers 515F (5′-GTGCCAGCMGCCGCGGTAA-3′) and 806R (5′-GGACTACHVGGGTATCTAAT-3′). Pro Taq DNA polymerase was used for PCR reactions, with a total reaction volume of 20 μL. The PCR amplification program was set as follows: initial denaturation at 95 °C for 3 min; followed by 27 cycles of denaturation at 95 °C for 30 s, annealing at 55 °C for 30 s, and extension at 72 °C for 45 s; and a final extension at 72 °C for 10 min.

After quality verification of the amplified products, high-throughput sequencing was conducted on the Illumina MiSeq PE300 platform by Shanghai Majorbio Bio-pharm Technology Co., Ltd.

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Where it is published

Catalogue records · 1

Topics

Inferred from text
Evolutionary biology 72% · Sequencing 75%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
ScienceDB10.57760/sciencedb.4390911 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[field].local:field:social-sciencemapping · scidb cnconnector:scidb_cn@1.0.0
concepts[modality].local:modality:sequencingenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
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