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Omics · study · 2026

Transcriptomic response of Trichoderma atroviride to different carbon sources

Listed in NCBI GEO

RNA-seq analysis of Trichoderma atroviride grown under different carbon source conditions (glucose, xylan, and no carbon).

Description

The aim of the experiment is to characterize transcriptional changes associated with carbon source utilization and metabolic adaptation. Three biological replicates were sequenced for each condition using Illumina sequencing.

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Topics

Stated by source
Expression profiling by high throughput sequencing
From keywords
Life Sciences
Inferred from text
RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32509311 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title