Data · dataset · 2026
Soil viruses on the Tibetan Plateau
Listed in ScienceDB
Dataset Generation & Processing Steps: Soil samples (n=126) were collected from the Qinghai-Tibet Plateau in May 2023.
Description
After removing the top 2 cm of soil, three parallel samples were taken from six land-use types (Forest, Farmland, Village, Greenbelt, Park, Residential area) across seven cities with varying urbanization levels (Linzhi, Shannan, Qamdo, Lhasa, Baoshan, Kunming, Chengdu). Samples were stored at 4°C, manually cleaned of roots/gravels, and sieved through a 10-mesh (2 mm) screen.
Soil physicochemical properties (pH, moisture, organic matter) were measured. Total soil DNA and viral DNA were extracted using dedicated kits. Viral metagenomic (virome) and bulk metagenomic sequencing were performed on an Illumina NovaSeq 6000 platform. Time: May 2023.Space: Qinghai-Tibet Plateau region (Longitude 91.068°E – 104.051°E; Latitude 25.048°N – 31.159°N).
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.27600 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.27600 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |