Data · dataset · 2025
Supplementary Data for "Development, benchtop validation, and application of a novel method for single-cell high-throughput assessment of phytoplankton from the environment (SHAPE)"
Listed in Borealis
This folder contains supplementary data for the manuscript "Development, benchtop validation, and application of a novel method for single-cell high-throughput assessment of phytoplankton from the environment (SHAPE)".
Description
This manuscript is currently under review in the Journal of Environmental Studies and Sciences, and the record will be updated with publication details upon acceptance of the manuscript. This research aims to validate a novel high-throughput assessment method for phytoplankton from the environment.
Five microalgal strains of known taxonomic identity were mixed at equal proportions and isolated using ultra-dilution into 384-well microplates. The plate wells were then subjected to fluorescence microscopy and cells were counted at weekly intervals over a 14-day monitoring period. The data presented here represents the cell data count, summaries of growth, and associated growth parameters (exponential growth constant and doubling time) for these experiments, as well as the R script used for figure creation and data analysis.
Links
Where it is published
- Dataverse dataset page borealisdata.ca/dataset.xhtml?persistentId=doi%3A10.5683%2FSP3%2FQMEPE3 ↗
landing page · from borealisdata ca
- DOI doi.org/10.5683/sp3/qmepe3 ↗
DOI / persistent id · from borealisdata ca
Catalogue records · 1
- Dataverse API borealisdata.ca/api/datasets/:persistentId/?persistentId=doi%3A10.5683%2FSP3%2… ↗
metadata API · from borealisdata ca
Topics
- Stated by source
- Earth and Environmental Sciences · Medicine, Health and Life Sciences
- From keywords
- Earth & Environmental Science · Life Sciences · Medicine & Health
- Inferred from text
- Bioinformatics and computational biology 75% · Microscopy 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Borealis | doi:10.5683/SP3/QMEPE3 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3102 | enrichment · borealisdata ca | taxonomy-embedding@1.1.0 | title+keywords+description (75%) |
| concepts[field].dataverse_subject:earth-and-environmental-sciences | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[modality].local:modality:microscopy | enrichment · borealisdata ca | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| description | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /description |
| publication_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| title | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /name |
| updated_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| version_label | source · borealisdata ca | connector:borealisdata_ca@1.0.0 |