Omics · study · 2026
Canonical mTOR protein supports complete fin regeneration with selective effects on myeloid transcriptional programs
Listed in NCBI GEO
The mechanistic target of rapamycin (mTOR) is a conserved regulator of cellular growth, metabolism, and tissue repair.
Description
Salamanders possess unique amino acid expansions in mTOR proposed to confer hypersensitive kinase activity, raising the possibility that canonical mTOR is insufficient to support complex appendage regeneration. We tested this hypothesis in the Senegal bichir (Polypterus senegalus), a ray-finned fish capable of complete fin regeneration.
Fin amputation triggered rapid activation of mTOR signaling, and pharmacological inhibition of mTOR abolished regeneration despite successful wound closure. Single-nucleus RNA sequencing across regenerative stages revealed selective upregulation of mTOR pathway components in proliferating epidermal and connective tissue cells, and in myeloid cells. Inhibition of mTOR specifically attenuated the induction of translational machinery and glycolytic profiles and disproportionately affected myeloid transcriptional states associated with innate immune recognition, interferon-associated signaling, and antigen processing.
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We propose that salamander-specific mTOR hypersensitivity represents an evolutionary acceleration of an ancestral regenerative program, rather than a prerequisite for limb regeneration.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE341nnn/GSE341393 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341393 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1502413 ncbi.nlm.nih.gov/bioproject/PRJNA1502413 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE341393 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |