Table · dataset · 2026
Dataset for Identifying barrierless mechanisms for benzene formation in the interstellar medium using permutationally-invariant reaction discovery
Listed in figshare
Complex chemical reaction environments, such as those found in combustion engines, the upper atmosphere, or the interstellar medium, can contain large numbers of different reactive species participating in similarly large numbers of different chemical reactions.
Description
In such settings, identifying the most-likely multistep reaction mechanisms which lead to the production of a particular defined product species is an extremely challenging problem, requiring search and evaluation over a large number of different possible candidate mechanisms while also addressing the permutational challenges posed when considering a large number of reaction routes available to sets of identical molecular species.
In this article, the problem of generating candidate reaction mechanisms which form a defined product from a diverse set of reactive molecules is cast as a discrete optimization of a permutationally invariant cost function describing similarity between the target product and the product generated by a trial reaction mechanism. This approach is demonstrated by generating 2230 candidate reaction mechanisms which form benzene from diverse sets of reactive molecules which have been experimentally identified in the interstellar medium.
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By screening this set of autogenerated mechanisms, using dispersion-corrected DFT to evaluate reaction energies and activation barriers, we identify several candidate barrierless reaction mechanisms (both previously proposed and new) for benzene formation which may operate in the low temperatures found in the interstellar medium and could be investigated further to supplement existing microkinetic models.<br><br>Data record consists of a tar.gz archive containing chemical structure data in xyz format as ascii text files.
Links
Where it is published
- DOI doi.org/10.82444/warw.33818398.v1 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare com
Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Medicine & Health · Ocean & Atmospheric Science · Social Science
- Inferred from text
- Density functional theory 65% · Physical chemistry 75% · Text 75%
Provenance · 1 source records, 19 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/33818398 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].anzsrc:group:3406 | enrichment · figshare com | taxonomy-embedding@1.0.0 | title+keywords+description (75%) |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[method].local:method:dft | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:text | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |