Data · dataset · 2022
RNA-Seq data of Siniperca chuatsi rhabdovirus infected S. chuatsi skin cells
Listed in ScienceDB
As an economic important fish, aquaculture of Siniperca chuatsi has been hampered by diseases caused by viruses, such as S. chuatsi rhabdovirus (SCRV).
Description
Host responses of S. chuatsi during SCRV infection still need to be explored. In the present study, transcriptome responses of a cultured S. chuatsi skine cell line (SCSC) infected by SCRV were investigated.
At the detected time points, 3, 12, 24, and 36 hours post infection (hpi), 38, 353, 896, and 1452 differentially expressed genes (DEGs) were obtained respectively. Go and KEGG enrichment analysis showed the genes related to stimulus were highly enriched, and the significantly enriched pathways from multiple time points.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.03063 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.03063 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |