Data · dataset · 2021
Data from: Genetic signature of adaptive peak shift in threespine stickleback
Listed in Borealis and Agri-environmental Research Data Dataverse — shown once because both records carry DOI 10.5683/sp2/cvculb
Description
Abstract
Transition of an evolving population to a new adaptive optimum is predicted to leave a signature in the distribution of effect sizes of fixed mutations. If they affect many traits (are pleiotropic), large effect mutations should contribute more when a population evolves to a farther adaptive peak than to a nearer peak. We tested this prediction in wild threespine stickleback fish (Gasterosteus aculeatus) by comparing the estimated frequency of large effect genetic changes underlying evolution as the same ancestor adapted to two lake types since the end of the ice age.
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A higher frequency of large effect genetic changes (quantitative trait loci) contributed to adaptive evolution in populations that adapted to lakes representing a more distant optimum than to lakes in which the optimum phenotype was nearer to the ancestral state. Our results also indicate that pleiotropy, not just optimum overshoot, contributes to this difference. These results suggest that a series of adaptive improvements to a new environment leaves a detectable mark in the genome of wild populations.
Although not all assumptions of the theory are likely met in natural systems, the prediction may be robust enough to the complexities of natural environments to be useful when forecasting adaptive responses to large environmental changes.
Usage notes
Cranby E4 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Cranby E4 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Cranby E5 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Cranby E5 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Cranby E6 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Cranby E6 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Cranby E10 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Cranby E10 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Hoggan H5 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Hoggan H5 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Hoggan H7 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Hoggan H17 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Hoggan H17 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Hoggan H19 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Hoggan H19 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Graham 1 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Graham 1 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Graham 2 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Graham 2 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Graham 10 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Graham 10 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Graham 11 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Graham 11 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Paq A3 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Paq A3 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Paq A5 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Paq A5 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Paq A7 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. Paq A7 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Paq A10 pheno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Paq A10 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing. A 3-digit entry refers to a homozygote.
For sex, a "1" refers to male while a "0" refers to female. NHG wild genotypes Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits. A "0" or blank means data are missing.
A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female. Hoggan H7 geno Microsatellite allele sizes are always presented as "smaller,larger" so that a 5 digit entry can be decoded as smaller=first 2 digits, larger=last 3 digits.
A "0" or blank means data are missing. A 3-digit entry refers to a homozygote. For sex, a "1" refers to male while a "0" refers to female.
Links
Where it is published
- Dataverse dataset page borealisdata.ca/dataset.xhtml?persistentId=doi%3A10.5683%2FSP2%2FCVCULB ↗
landing page · from borealisdata ca
- DOI doi.org/10.5683/sp2/cvculb ↗
DOI / persistent id · from borealisdata ca
Catalogue records · 1
- Dataverse API borealisdata.ca/api/datasets/:persistentId/?persistentId=doi%3A10.5683%2FSP2%2… ↗
metadata API · from borealisdata ca
Topics
- From keywords
- Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Life Sciences · Mathematics & Statistics · Medicine & Health · Ocean & Atmospheric Science · Social Science
- Inferred from text
- Evolutionary biology 74%
Provenance · 2 source records, 21 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Borealis | doi:10.5683/SP2/CVCULB | 9 d ago | JSON v1 |
| Agri-environmental Research Data Dataverse | doi:10.5683/SP2/CVCULB | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3104 | enrichment · borealisdata ca | taxonomy-embedding@1.0.0 | title+keywords+description (74%) |
| concepts[field].dataverse_subject:other | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].dataverse_subject:other | source · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:chemistry | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:computer-science-ai | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:economics-finance | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:engineering | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:humanities | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:mathematics-statistics | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:ocean-atmospheric | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| concepts[field].local:field:social-science | mapping · borealisdata ca dataverse | connector:borealisdata_ca_dataverse@1.0.0 | /subjects |
| created_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| description | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /description |
| publication_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| title | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /name |
| updated_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| version_label | source · borealisdata ca | connector:borealisdata_ca@1.0.0 |