Data · dataset · 2025
Single-cell ATAC sequencing data from: Single-cell genomics details the maturation block in BCP-ALL and identifies therapeutic vulnerabilities in DUX4-r cases
Listed in Researchdata.se
This dataset contains single-cell ATAC sequencing data from nineteen cases of childhood BCP-ALL and four samples of mononuclear cells from normal bone marrow from healthy donors.
Description
The dataset is available as raw sequencing reads (fastq; restricted access) or as an annotated ATAC dataset (h5ad). The libraries were prepared according to the manufacturer’s instructions (10x Genomics CG000169: Nuclei Isolation for Single Cell ATAC Sequencing; 10x Genomics CG000209: Chromium Single Cell ATAC Reagent Kits v1.1).) and sequenced on a Novaseq 6000.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.23592303 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Medicine & Health
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-23592303/0 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license_text | source · researchdata se | connector:researchdata_se@1.0.0 | |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |