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Table · dataset · 2026

Spinal cord connectome dataset

Listed in figshare

Description

<p dir="ltr"><b>Dataset associated with the spinal cord connectomics project and the evidence-based reconstruction of the mammalian spinal cord connectome.</b></p><p dir="ltr">The archive contains the neuroVIISAS project representation of the spinal cord connectome together with adjacency matrices and the anatomical region selection used for the analyses reported in the associated publication.</p><p dir="ltr"><b>Contents of the archive:</b></p><ol><li><code><strong>SpinalCordConnectomeProject.brain</strong></code><br>neuroVIISAS project file containing the anatomical regions and connectivity data of the reconstructed spinal cord connectome.

The project can be opened with <code><strong>neuroVIISAS.jar</strong></code>, which is provided separately as part of the Software component of this Figshare project.</li><li><code><strong>cumulated_adjacency_matrix.csv</strong></code> and <code><strong>cumulated_adjacency_matrix.csv.abg.txt</strong></code><br>The CSV file contains the <b>cumulated connectivity adjacency matrix</b>. The accompanying <code>.abg.txt</code> file provides the corresponding anatomical region assignments required to map matrix indices to neuroanatomical structures.</li><li><code><strong>direct_connectivity_average_weight_adjacency_matrix.csv</strong></code> and <code><strong>direct_connectivity_average_weight_adjacency_matrix.csv.abk.txt</strong></code><br>The CSV file contains the adjacency matrix of <b>direct anatomical connectivity using average connection weights</b>.

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The accompanying <code>.abk.txt</code> file provides the corresponding anatomical region assignments.</li><li><code><strong>bilat.xml</strong></code><br>neuroVIISAS selection file defining the <b>exact bilateral set of anatomical regions used to construct the spinal cord connectome analyzed in the associated publication</b>. In neuroVIISAS, this selection can be loaded via:<br><b>Analysis → Advanced connectivity analysis → File → Load selection</b>.</li></ol><p dir="ltr">The anatomical atlas images optionally used for visualization in neuroVIISAS are <b>not included in this dataset</b>. neuroVIISAS may request these images when the software is started; however, they are <b>not required for loading the connectivity data or performing the connectome analyses described in the associated publication</b>.

The atlas images can be made available separately upon specific request.</p><p dir="ltr">Together, these files provide both the native neuroVIISAS representation of the spinal cord connectome and matrix-based representations suitable for independent computational and network analyses.</p>

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Catalogue records · 1

Topics

Inferred from text
Image 65%
Provenance · 1 source records, 21 field assertions
SourceKeyLast seenRaw
figshareoai:figshare.com:article/336599447 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · figshare comconnector:figshare_com@1.0.0
concepts[field].anzsrc:field:320901mapping · figshare comvocabulary-mapper@1.0.0keywords['Autonomic nervous system']
concepts[field].anzsrc:field:320903mapping · figshare comvocabulary-mapper@1.0.0keywords['Central nervous system']
concepts[field].anzsrc:field:320906mapping · figshare comvocabulary-mapper@1.0.0keywords['Peripheral nervous system']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:engineeringmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[modality].local:modality:imageenrichment · figshare comkeyword-concept-rules@1.0.0title+description (65%)
descriptionsource · figshare comconnector:figshare_com@1.0.0/metadata/dc/description
licensesource · figshare comconnector:figshare_com@1.0.0/metadata/dc/rights
publication_datesource · figshare comconnector:figshare_com@1.0.0
titlesource · figshare comconnector:figshare_com@1.0.0/metadata/dc/title