Table · dataset · 2026
Spinal cord connectome dataset
Listed in figshare
Description
<p dir="ltr"><b>Dataset associated with the spinal cord connectomics project and the evidence-based reconstruction of the mammalian spinal cord connectome.</b></p><p dir="ltr">The archive contains the neuroVIISAS project representation of the spinal cord connectome together with adjacency matrices and the anatomical region selection used for the analyses reported in the associated publication.</p><p dir="ltr"><b>Contents of the archive:</b></p><ol><li><code><strong>SpinalCordConnectomeProject.brain</strong></code><br>neuroVIISAS project file containing the anatomical regions and connectivity data of the reconstructed spinal cord connectome.
The project can be opened with <code><strong>neuroVIISAS.jar</strong></code>, which is provided separately as part of the Software component of this Figshare project.</li><li><code><strong>cumulated_adjacency_matrix.csv</strong></code> and <code><strong>cumulated_adjacency_matrix.csv.abg.txt</strong></code><br>The CSV file contains the <b>cumulated connectivity adjacency matrix</b>. The accompanying <code>.abg.txt</code> file provides the corresponding anatomical region assignments required to map matrix indices to neuroanatomical structures.</li><li><code><strong>direct_connectivity_average_weight_adjacency_matrix.csv</strong></code> and <code><strong>direct_connectivity_average_weight_adjacency_matrix.csv.abk.txt</strong></code><br>The CSV file contains the adjacency matrix of <b>direct anatomical connectivity using average connection weights</b>.
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The accompanying <code>.abk.txt</code> file provides the corresponding anatomical region assignments.</li><li><code><strong>bilat.xml</strong></code><br>neuroVIISAS selection file defining the <b>exact bilateral set of anatomical regions used to construct the spinal cord connectome analyzed in the associated publication</b>. In neuroVIISAS, this selection can be loaded via:<br><b>Analysis → Advanced connectivity analysis → File → Load selection</b>.</li></ol><p dir="ltr">The anatomical atlas images optionally used for visualization in neuroVIISAS are <b>not included in this dataset</b>. neuroVIISAS may request these images when the software is started; however, they are <b>not required for loading the connectivity data or performing the connectome analyses described in the associated publication</b>.
The atlas images can be made available separately upon specific request.</p><p dir="ltr">Together, these files provide both the native neuroVIISAS representation of the spinal cord connectome and matrix-based representations suitable for independent computational and network analyses.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.33659944.v1 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare com
Topics
- From keywords
- Astronomy & Astrophysics · Autonomic nervous system · Central nervous system · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Mathematics & Statistics · Medicine & Health · Ocean & Atmospheric Science · Peripheral nervous system · Social Science
- Inferred from text
- Image 65%
Provenance · 1 source records, 21 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/33659944 | 7 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].anzsrc:field:320901 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Autonomic nervous system'] |
| concepts[field].anzsrc:field:320903 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Central nervous system'] |
| concepts[field].anzsrc:field:320906 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Peripheral nervous system'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |