Data · dataset · 2022
MSH WSD
Listed in Hugging Face Datasets
Evaluation of Word Sense Disambiguation methods (WSD) in the biomedical domain is difficult because the available resources are either too small or too focused on specific types of entities (e.g. diseases or genes).
Description
We have developed a method that can be used to automatically develop a WSD test collection using the Unified Medical Language System (UMLS) Metathesaurus and the manual MeSH indexing of MEDLINE. The resulting dataset is called MSH WSD and consists of 106 ambiguous abbreviations, 88 ambiguous terms and 9 which are a combination of both, for a total of 203 ambiguous words.
Each instance containing the ambiguous word was assigned a CUI from the 2009AB version of the UMLS. For each ambiguous term/abbreviation, the data set contains a maximum of 100 instances per sense obtained from MEDLINE; totaling 37,888 ambiguity cases in 37,090 MEDLINE citations.
Links
Where it is published
- Hugging Face dataset page huggingface.co/datasets/bigbio/msh_wsd ↗
landing page · from Hugging Face
Catalogue records · 1
- Hub API huggingface.co/api/datasets/bigbio/msh_wsd ↗
metadata API · from Hugging Face
Topics
- From keywords
- Computer Science & AI
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Hugging Face Datasets | bigbio/msh_wsd | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Hugging Face | connector:huggingface@1.0.0 | /gated |
| concepts[field].local:field:computer-science-ai | mapping · Hugging Face | connector:huggingface@1.0.0 | |
| created_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| description | source · Hugging Face | connector:huggingface@1.0.0 | /description |
| license_text | source · Hugging Face | connector:huggingface@1.0.0 | |
| publication_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| title | source · Hugging Face | connector:huggingface@1.0.0 | /id |
| updated_date | source · Hugging Face | connector:huggingface@1.0.0 |