Data · dataset · 2026
Whole-genome resequencing and transcriptome dataset for QTL mapping of yellow stem borer resistance in rice
Listed in ScienceDB
This dataset originates from a genetic dissection study of yellow stem borer (Scirpophaga incertulas) resistance in rice.
Description
A high-density bin map comprising 3,327 bin markers (spanning 2,136.8 cM) was constructed via whole-genome resequencing of 265 F9 recombinant inbred lines derived from resistant parent A232 and susceptible parent G46B. A major QTL, qTir04, was detected on chromosome 4 and validated using near-isogenic lines.
The dataset includes: (1) whole-genome resequencing raw data of parents and RIL population; (2) bin genetic map data; (3) field phenotype data (dead heart index) of RIL and NIL populations; (4) RNA-seq transcriptome data of NIL materials. This dataset provides genetically validated QTL intervals and closely linked molecular markers for rice insect-resistant molecular breeding.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.j00268.00010 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Gene mapping 78% · Heart 75% · RNA sequencing 65%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.j00268.00010 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:field:310506 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (78%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |