Excel · study · 2026
Hepatic tissue-derived extracellular vesicles miRNA regulates hypoxia tolerance in Pelteobagrus vachellii by reprogramming metabolism to maintain liver homeostasis
Listed in NCBI GEO
Hypoxia is a critical environmental stressor that affects fish survival and physiological metabolism.
Description
Extracellular vesicles (EVs) mediate intercellular signal communication and perform vital functions in the stress response of aquatic organisms; however, the functional regulatory mechanisms of EVs under hypoxia in fish remain unelucidated. In this study, we optimized enzymatic digestion and combined with ultracentrifugation and high-precision iodixanol density gradient centrifugation, high-purity hepatic EVs were efficiently isolated from Pelteobagrus vachelli, which were internalized by primary hepatocytes successfully.
Integrative analyses of the EVs miRNAome and hepatic transcriptome were performed to construct a miRNA-mRNA negative regulatory network, identifying metabolic reprogramming, HIF-1 signaling, cellular homeostasis and stress response as core pathways in hypoxic adaptation. In vivo functional validation revealed that hypoxia-induced EVs (Hypo-EVs) reduced the critical asphyxiation point, enhanced blood oxygen-carrying capacity, and alleviated hypoxia-induced hepatic oxidative damage in a dose-dependent manner, thereby significantly improving the hypoxia tolerance of P. vachelli.
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Mechanistic studies revealed that miR-135a is the core functional molecule within Hypo-EVs, and its expression was significantly downregulated under hypoxia. Overexpression of miR-135a reversed the hypoxic protective capacity of Hypo-EVs, whereas inhibition of miR-135a significantly enhanced hypoxia tolerance. Dual-luciferase and in vivo validation confirmed that miR-135a directly targets the 3'-UTRs of the glycolysis/gluconeogenesis key genes hk1 and pck2, negatively regulates glucose metabolism at the post-transcriptional level and mediates hypoxia adaptation through metabolic reprogramming.
Collectively, this study clarifies the molecular mechanism by which the Hypo-EVs/miR-135a/hk1/pck2 signaling axis regulates hypoxia tolerance in P. vachellii. These findings provide theoretical references for research on fish hypoxic response mechanisms and stress-resilient aquaculture regulation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE338nnn/GSE338907 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338907 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1496360 ncbi.nlm.nih.gov/bioproject/PRJNA1496360 ↗
project · from NCBI GEO
Topics
- Stated by source
- Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE338907 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |