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Omics · study · 2026

The effect of aging on gene expression of the African turquiose killfiish optic nerve

Listed in NCBI GEO

White matter dysfunction is a hallmark of brain aging and often precedes overt neurodegeneration, yet the cellular alterations connecting aging to white matter dysfunction remain poorly understood.

Description

The short lived African turquoise killifsh (Nothobranchius furzeri, GRZ-AD) is a valuable genetic model for ageing studies, displaying rapid ageing phenotypes within its four to six-month lifespan. Given the glia-dominant composition of the optic nerve, we reasoned that the killifish optic nerve would provide a suitable model to capture these age-related molecular signatures and gain insight into white matter aging.

We therefore performed bulk RNAseq on optic nerves from young-adult (6-week-old) and aged (18-week-old) killifish. Our findings demonstrate that the aging killifish optic nerve reliably recapitulates the core molecular hallmarks of mammalian CNS aging. This conservation supports the use of the killifish optic nerve to resolve and understand how the CNS immune and glial cell populations contribute to these age-associated changes.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 65%
Provenance · 1 source records, 7 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE34753113 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title